8.1.1.1.1.5.1.2. skimpy.analysis.oracle.dummy_free_energies

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Copyright 2018 Laboratory of Computational Systems Biotechnology (LCSB), Ecole Polytechnique Federale de Lausanne (EPFL), Switzerland

Licensed under the Apache License, Version 2.0 (the “License”); you may not use this file except in compliance with the License. You may obtain a copy of the License at

http://www.apache.org/licenses/LICENSE-2.0

Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an “AS IS” BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License.

8.1.1.1.1.5.1.2.1. Attributes

BIGM

BIGM_THERMO

BIGM_DG

BIGM_P

EPSILON

MAX_STOICH

8.1.1.1.1.5.1.2.2. Functions

add_undefined_delta_g(_tmodel, solution[, ...])

add_dummy_delta_g(tmodel, rxn[, delta_g_std, ...])

8.1.1.1.1.5.1.2.3. Module Contents

skimpy.BIGM
skimpy.BIGM_THERMO
skimpy.BIGM_DG
skimpy.BIGM_P
skimpy.EPSILON
skimpy.MAX_STOICH = 10
skimpy.add_undefined_delta_g(_tmodel, solution, delta_g_std=-10, delta_g_std_err=2, add_displacement=True, inplace=True, exclude_reactions=[])
skimpy.add_dummy_delta_g(tmodel, rxn, delta_g_std=-100, delta_g_std_err=2, add_displacement=True)