8.1.1.8.1.5. skimpy.utils.general

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Copyright 2017 Laboratory of Computational Systems Biotechnology (LCSB), Ecole Polytechnique Federale de Lausanne (EPFL), Switzerland

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http://www.apache.org/licenses/LICENSE-2.0

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8.1.1.8.1.5.1. Module Contents

8.1.1.8.1.5.1.1. Functions

join_dicts(dicts)

get_stoichiometry(kinetic_model, variables)

check_is_symbol(s_in)

sanitize_cobra_vars(met_name)

get_all_subclasses(cls)

make_subclasses_dict(cls)

robust_index(in_var)

Indexing can be done with symbols or strings representing the symbol,

get_all_reactants(model)

skimpy.join_dicts(dicts)
skimpy.get_stoichiometry(kinetic_model, variables)
skimpy.check_is_symbol(s_in)
skimpy.sanitize_cobra_vars(met_name)
skimpy.get_all_subclasses(cls)
skimpy.make_subclasses_dict(cls)
skimpy.robust_index(in_var)

Indexing can be done with symbols or strings representing the symbol, so we harmonize it by returning the name of the symbol if the input is of type symbol

Parameters

in_var (str or sympy.Symbol) –

Returns

skimpy.get_all_reactants(model)