8.1.1.6.1.4. `skimpy.sampling.ga_flux_concentration_sampler`¶

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8.1.1.6.1.4.1. Module Contents¶

8.1.1.6.1.4.1.1. Classes¶

`ItterableSeries`
`GaFluxConcentrationSampler`	This sampler performs an optimizaion

8.1.1.6.1.4.1.2. Functions¶

`convex_mating`(ind1, ind2, eta=0.5)
`sample_parameters`(kmodel, tmodel, individual, param_sampler, scaling_parameters, only_stable=True)	Run sampling on first order model

8.1.1.6.1.4.1.3. Attributes¶

model_gen

class skimpy.ItterableSeries(this_series)¶

__iter__(self)¶

skimpy.model_gen¶

class skimpy.GaFluxConcentrationSampler(parameters=None)¶

Bases: skimpy.sampling.flux_concentration_sampler.FluxConcentrationSampler

This sampler performs an optimizaion

Parameters¶

__defaults__¶

sample(self, tmodel, kmodel, simple_parameter_sampler, only_stable=True)¶

Parameters

compiled_model –
flux_dict –
concentration_dict –
seed –
max_generation –
mutation_probability –
eta –

Returns

fitness(self, flux_concentration)¶

run_ea(self, toolbox, stats=None, verbose=False)¶

sample_tfa_model(self, n_samples)¶