8.1.1.4.1.5. skimpy.io.sbml¶
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Licensed under the Apache License, Version 2.0 (the “License”); you may not use this file except in compliance with the License. You may obtain a copy of the License at
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8.1.1.4.1.5.1. Module Contents¶
8.1.1.4.1.5.1.1. Functions¶
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If 'value' is None, prints an error message constructed using |
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8.1.1.4.1.5.1.2. Attributes¶
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Check function adapted as recommended from SBML-examples: |
- skimpy.TIME = hour¶
- skimpy.SUBSTANCE = micromole¶
- skimpy.VOLUME = litre¶
Check function adapted as recommended from SBML-examples: See: https://synonym.caltech.edu/software/libsbml/5.18.0/docs/formatted/python-api/create_simple_model_8py-example.html
- skimpy.check(value, message)¶
If ‘value’ is None, prints an error message constructed using ‘message’ and then exits with status code 1. If ‘value’ is an integer, it assumes it is a libSBML return status code. If the code value is LIBSBML_OPERATION_SUCCESS, returns without further action; if it is not, prints an error message constructed using ‘message’ along with text from libSBML explaining the meaning of the code, and exits with status code 1.
- skimpy.export_sbml(kmodel, filename, time_unit=TIME, substance_unit=SUBSTANCE, volume_unit=VOLUME)¶
- skimpy.import_sbml(filename)¶
- skimpy.get_reversiblity(reaction)¶
- skimpy.get_unit(parameter_name, substance_unit=SUBSTANCE)¶
- skimpy.add_units(model, time_unit=TIME, substance_unit=SUBSTANCE, volume_unit=VOLUME)¶