8.1.1.2.1.2. skimpy.core.itemsets

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Copyright 2017 Laboratory of Computational Systems Biotechnology (LCSB), Ecole Polytechnique Federale de Lausanne (EPFL), Switzerland

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8.1.1.2.1.2.1. Module Contents

8.1.1.2.1.2.1.1. Classes

Item

ItemSet

Helper class that provides a standard way to create an ABC using

Parameter

ParameterSet

Helper class that provides a standard way to create an ABC using

Reactant

ReactantSet

Helper class that provides a standard way to create an ABC using

8.1.1.2.1.2.1.2. Functions

make_parameter_set(mechanism, param_declaration)

make_reactant_set(mechanism, reactant_declaration)

class pytfa.Item(name, value=None, model=None, suffix='')

Bases: object

_generate_symbol(self)
property symbol(self)
property suffix(self)
property bounds(self)
__str__(self)

Return str(self).

__repr__(self)

Return repr(self).

class pytfa.ItemSet(mechanism)

Bases: abc.ABC, skimpy.utils.tabdict.TabDict

Helper class that provides a standard way to create an ABC using inheritance.

__reduce__(self)

helper for pickle

class pytfa.Parameter(name, required_for=None, value=None, model=None, suffix='')

Bases: Item

class pytfa.ParameterSet(mechanism, param_declaration, param_values, suffix='')

Bases: ItemSet

Helper class that provides a standard way to create an ABC using inheritance.

property required_for(self)
pytfa.make_parameter_set(mechanism, param_declaration)
class pytfa.Reactant(name, value=None, model=None, suffix='')

Bases: Item

class pytfa.ReactantSet(mechanism, reactant_declaration, reactant_values)

Bases: ItemSet

Helper class that provides a standard way to create an ABC using inheritance.

pytfa.make_reactant_set(mechanism, reactant_declaration)