8.1.1.9.1.2. skimpy.viz.escher

8.1.1.9.1.2.1. Attributes

DEFAULT_CHROME

8.1.1.9.1.2.2. Functions

plot_fluxes(flux_dict, escher_map[, output_file, ...])
animate_fluxes(flux_time_data, escher_map[, ...])

8.1.1.9.1.2.3. Module Contents

skimpy.viz.escher.DEFAULT_CHROME = '/opt/google/chrome/chrome'

skimpy.viz.escher.plot_fluxes(flux_dict, escher_map, output_file='map.html', height=600, width=800, reaction_scale=None, min_flux=-10, max_flux=10)

skimpy.viz.escher.animate_fluxes(flux_time_data, escher_map, outputfile='animation.mp4', height=600, width=800, time_interval_ms=100, chrome=DEFAULT_CHROME, reaction_scale=None, min_flux=None, max_flux=None, time_size=12, time_unit='h', x_time=0.95, y_time=0.9)