skimpy
Contents:
1. Quick start
2. Reading and writing model files
3. Draft model generation from COBRA/ pyTFA
4. ORACLE parameter sampling
5. Metabolic control analysis
6. Modal analysis
7. Non-linear dynamic simulations
8. API Reference
8.1. skimpy
8.1.1. Submodules
8.1.1.1. skimpy.analysis
8.1.1.2. skimpy.core
8.1.1.3. skimpy.inference
8.1.1.4. skimpy.io
8.1.1.5. skimpy.mechanisms
8.1.1.6. skimpy.sampling
8.1.1.7. skimpy.simulations
8.1.1.8. skimpy.utils
8.1.1.9. skimpy.viz
skimpy
8.
API Reference
8.1.
skimpy
8.1.1.3.
skimpy.inference
8.1.1.3.1.1.
skimpy.inference.experiment
View page source
8.1.1.3.1.1.
skimpy.inference.experiment
¶
8.1.1.3.1.1.1.
Classes
¶
Observable
SteadyStateExperiment
8.1.1.3.1.1.2.
Module Contents
¶
class
skimpy.inference.experiment.
Observable
(
name
,
dict
)
[source]
¶
Bases:
object
name
[source]
¶
_dict
[source]
¶
__call__
(
X
)
[source]
¶
class
skimpy.inference.experiment.
SteadyStateExperiment
(
observables
,
mu
,
var
)
[source]
¶
Bases:
object
observables
[source]
¶
mu
[source]
¶
var
[source]
¶
_distribution_observables
[source]
¶
p
(
fluxes
,
concentrations
)
[source]
¶