8.1.1.1.1.2.1.7. skimpy.analysis.mca.utils¶

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Licensed under the Apache License, Version 2.0 (the “License”); you may not use this file except in compliance with the License. You may obtain a copy of the License at

http://www.apache.org/licenses/LICENSE-2.0

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8.1.1.1.1.2.1.7.1. Attributes¶

sparse_matrix

8.1.1.1.1.2.1.7.2. Functions¶

`get_reversible_fluxes`(net_fluxes, displacements, reactions)
`get_dlogx_dlogy`(sympy_expression, variable)	Calc d_log_x/d_log_y = y/x*dx/dy
`get_reduced_stoichiometry`(kinetic_model, all_variables)
`get_dep_indep_vars_from_basis`(L0[, all_dependent_ix, ...])

8.1.1.1.1.2.1.7.3. Module Contents¶

skimpy.sparse_matrix¶

skimpy.get_reversible_fluxes(net_fluxes, displacements, reactions)¶

Parameters:

net_fluxes – dict of net-fluxes
displacements – dict of displacements for reversible reactions
reactions – list of reaction names

Returns:

skimpy.get_dlogx_dlogy(sympy_expression, variable)¶: Calc d_log_x/d_log_y = y/x*dx/dy

skimpy.get_reduced_stoichiometry(kinetic_model, all_variables, all_dependent_ix=None)¶

skimpy.get_dep_indep_vars_from_basis(L0, all_dependent_ix=None, concentrations=None)¶