8.1.1.1.1.2.1.4. skimpy.analysis.mca.jacobian_fun¶

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Licensed under the Apache License, Version 2.0 (the “License”); you may not use this file except in compliance with the License. You may obtain a copy of the License at

http://www.apache.org/licenses/LICENSE-2.0

Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an “AS IS” BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License.

8.1.1.1.1.2.1.4.1. Classes¶

JacobianFunction

8.1.1.1.1.2.1.4.2. Module Contents¶

class skimpy.JacobianFunction(reduced_stoichometry, independent_elasticity_function, dependent_elasticity_function, volume_ratio_function, conservation_relation, independent_variable_ix, dependent_variable_ix)¶

reduced_stoichometry¶

dependent_elasticity_function¶

independent_elasticity_function¶

volume_ratio_function¶

independent_variable_ix¶

dependent_variable_ix¶

conservation_relation¶

__call__(fluxes, concentrations, parameters, flux_jacobian=False)¶

Parameters:

fluxes – Dict or pd.Series of reference flux vector
concentrations – Dict or pd.Series of reference concentration vector
parameters – Dict or pd.Series of reference parameters vector