skimpy.sampling.saturation_parameter_function ============================================= .. py:module:: skimpy.sampling.saturation_parameter_function .. autoapi-nested-parse:: .. module:: skimpy :platform: Unix, Windows :synopsis: Simple Kinetic Models in Python .. moduleauthor:: SKiMPy team [---------] Copyright 2017 Laboratory of Computational Systems Biotechnology (LCSB), Ecole Polytechnique Federale de Lausanne (EPFL), Switzerland Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an "AS IS" BASIS, WITHOUT WARRANTIE CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. Classes ------- .. autoapisummary:: skimpy.sampling.saturation_parameter_function.SaturationParameterFunction Module Contents --------------- .. py:class:: SaturationParameterFunction(model, parameters, concentrations) A class used in the process of sampling to calculate Km's. Provided with a model, creates `self.__call__` function using `Cython` to calculate Km's given (sampled) sigmas :param model: :param parameters: the parameters of the model. Parameters with a `.hook` field and an empty `.value` will be sampled :param concentrations: .. py:attribute:: sym_concentrations .. py:attribute:: saturation_parameters .. py:method:: __call__(saturations, parameters, concentrations, parameters_to_resample, fixed_parameters)